AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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ptaylor
August 10, 2018 05:01PM
Hi, Kate-

OK, I asked The Bob a bit more about this program, and he mentioned that @grayplot script is specifically made to partner with afni_proc.py output-- for most applications, this means that the relevant files to plot will be *+tlrc.BRIK/HEAD files; there will also be other things present to add to the plots. To do this, the @grayplot script has some hardwired features (e.g., the "tlrc" space assumption).

If you just want to make grayplots of a given time series file in a more general context, you can go to the source program, 3dGrayplot, which @grayplot utilizes:
[afni.nimh.nih.gov]

One or the other might be easier for a given usage case.

--pt
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@grayplot

katemills August 09, 2018 07:24PM

Re: @grayplot

ptaylor August 10, 2018 09:45AM

Re: @grayplot

katemills August 10, 2018 04:34PM

Re: @grayplot

ptaylor August 10, 2018 05:01PM

Re: @grayplot

katemills August 10, 2018 05:19PM

Re: @grayplot

RWCox August 11, 2018 08:15AM

Re: @grayplot

RWCox August 11, 2018 08:48PM

Re: @grayplot

rick reynolds August 15, 2018 09:05AM