AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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August 14, 2018 08:11PM
Hi Rick,

Thanks for the corrections. How would you recommend that I proceed to blur only in the gray matter mask? One way I have tried is going into the output script and changing the Mmask parameter in 3dBlurInMask to the gray matter mask produced by afni, but I'm not sure if this the best way.

On another note, I noticed that the GM mask created by afni does not have as many voxels as I need. Is there a way to decrease the threshold to increase the amount of voxels?

Daniel
Subject Author Posted

Usage of blur_opts_BIM

Daniel Zhu August 10, 2018 03:13PM

Re: Usage of blur_opts_BIM

rick reynolds August 13, 2018 04:31PM

Re: Usage of blur_opts_BIM

Daniel Zhu August 14, 2018 08:11PM