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Dear AFNI users-

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Sincerely, AFNI HQ

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lavr
August 16, 2018 03:54PM
Hi everyone,

I have been trying to finally put my data into analysis but I have encountered a problem. When I execute the 3dMVM program, the terminal gives me in return such a statement:
Error in if (len%%wd != 0) errex.AFNI(paste("The content under -dataTable is not rectangular !", :
argument is of length zero
Calls: process.MVM.opts
Execution halted

I have checked everything more than once, I have visited similar threads here as well but I can't seem to find where exactly the problem lies.

Here's my input:
3dMVM -prefix analysis_01.nii -jobs 8 \
-bsVars "Group+Tiv+Age" \
-wsVars Time \
-qVars 'Tiv,Age' \
-qVarCenters '1460,66' \
-num_glt 12 \
-mask mask.nii \
-gltLabel 1 class_base_vs_exp -gltCode 1 "Group : 1*classic Time : 1*base -1*exp" \
-gltLabel 2 class_exp_vs_base -gltCode 2 "Group : 1*classic Time : 1*exp -1*base" \
-gltLabel 3 ctrl_base_vs_exp -gltCode 3 "Group : 1*control Time : 1*base -1*exp" \
-gltLabel 4 ctrl_exp_vs_base -gltCode 4 "Group : 1*control Time : 1*exp -1*base" \
-gltLabel 5 vrtl_base_vs_exp -gltCode 5 "Group : 1*virtual Time : 1*base -1*exp" \
-gltLabel 6 vrtl_exp_vs_base -gltCode 6 "Group : 1*virtual Time : 1*exp -1*base" \
-gltLabel 7 class_exp_vs_ctrl_exp -gltCode 7 'Time : 1*exp Group : 1*classic -1*control' \
-gltLabel 8 ctrl_exp_vs_class_exp -gltCode 8 'Time : 1*exp Group : 1*control -1*classic' \
-gltLabel 9 vrtl_exp_vs_ctrl_exp -gltCode 9 'Time : 1*exp Group : 1*virtual -1*control' \
-gltLabel 10 ctrl_exp_vs_vrtl_exp -gltCode 10 'Time : 1*exp Group : 1*control -1*virtual' \
-gltLabel 11 vrtl_exp_vs_class_exp -gltCode 11 'Time : 1*exp Group : 1*virtual -1*classic' \
-gltLabel 12 class_exp_vs_vrtl_exp -gltCode 12 'Time : 1*exp Group : 1*classic -1*virtual' \

-dataTable @dataTable_01.txt

And here's the dataTable itself:
Subj Group Time Age Tiv InputFile
2 classic base 64 1349 smooth_mwp1rsub-02-ses-01_T1w_SS.nii
3 classic base 67 1548 smooth_mwp1rsub-03-ses-01_T1w_SS.nii
5 virtual base 66 1365 smooth_mwp1rsub-05-ses-01_T1w_SS.nii
9 classic base 73 1486 smooth_mwp1rsub-09-ses-01_T1w_SS.nii
11 virtual base 65 1603 smooth_mwp1rsub-11-ses-01_T1w_SS.nii
13 control base 64 1661 smooth_mwp1rsub-13-ses-01_T1w_SS.nii
18 classic base 68 1326 smooth_mwp1rsub-18-ses-01_T1w_SS.nii
19 classic base 64 1448 smooth_mwp1rsub-19-ses-01_T1w_SS.nii
20 classic base 68 1436 smooth_mwp1rsub-20-ses-01_T1w_SS.nii
21 classic base 71 1549 smooth_mwp1rsub-21-ses-01_T1w_SS.nii
22 classic base 66 1428 smooth_mwp1rsub-22-ses-01_T1w_SS.nii
26 classic base 68 1735 smooth_mwp1rsub-26-ses-01_T1w_SS.nii
27 control base 69 1409 smooth_mwp1rsub-27-ses-01_T1w_SS.nii
28 classic base 68 1448 smooth_mwp1rsub-28-ses-01_T1w_SS.nii
29 control base 65 1611 smooth_mwp1rsub-29-ses-01_T1w_SS.nii
30 virtual base 68 1531 smooth_mwp1rsub-30-ses-01_T1w_SS.nii
32 virtual base 67 1588 smooth_mwp1rsub-32-ses-01_T1w_SS.nii
33 virtual base 64 1366 smooth_mwp1rsub-33-ses-01_T1w_SS.nii
34 virtual base 64 1434 smooth_mwp1rsub-34-ses-01_T1w_SS.nii
36 virtual base 59 1285 smooth_mwp1rsub-36-ses-01_T1w_SS.nii
37 virtual base 71 1416 smooth_mwp1rsub-37-ses-01_T1w_SS.nii
38 classic base 65 1252 smooth_mwp1rsub-38-ses-01_T1w_SS.nii
41 classic base 71 1470 smooth_mwp1rsub-41-ses-01_T1w_SS.nii
50 control base 72 1439 smooth_mwp1rsub-50-ses-01_T1w_SS.nii
52 control base 71 1394 smooth_mwp1rsub-52-ses-01_T1w_SS.nii
53 control base 68 1237 smooth_mwp1rsub-53-ses-01_T1w_SS.nii
55 virtual base 69 1466 smooth_mwp1rsub-55-ses-01_T1w_SS.nii
57 classic base 68 1548 smooth_mwp1rsub-57-ses-01_T1w_SS.nii
58 control base 65 1536 smooth_mwp1rsub-58-ses-01_T1w_SS.nii
59 control base 71 1602 smooth_mwp1rsub-59-ses-01_T1w_SS.nii
60 virtual base 68 1409 smooth_mwp1rsub-60-ses-01_T1w_SS.nii
61 control base 64 1442 smooth_mwp1rsub-61-ses-01_T1w_SS.nii
64 control base 53 1365 smooth_mwp1rsub-64-ses-01_T1w_SS.nii
65 control base 65 1482 smooth_mwp1rsub-65-ses-01_T1w_SS.nii
66 control base 64 1651 smooth_mwp1rsub-66-ses-01_T1w_SS.nii
68 control base 58 1390 smooth_mwp1rsub-68-ses-01_T1w_SS.nii
69 classic base 69 1400 smooth_mwp1rsub-69-ses-01_T1w_SS.nii
72 control base 58 1379 smooth_mwp1rsub-72-ses-01_T1w_SS.nii
74 control base 66 1456 smooth_mwp1rsub-74-ses-01_T1w_SS.nii
2 classic exp 64 1349 smooth_mwp1rsub-02-ses-2_T1w_SS.nii
3 classic exp 67 1548 smooth_mwp1rsub-03-ses-2_T1w_SS.nii
5 virtual exp 66 1365 smooth_mwp1rsub-05-ses-2_T1w_SS.nii
9 classic exp 73 1486 smooth_mwp1rsub-09-ses-2_T1w_SS.nii
11 virtual exp 65 1603 smooth_mwp1rsub-11-ses-2_T1w_SS.nii
13 control exp 64 1661 smooth_mwp1rsub-13-ses-2_T1w_SS.nii
18 classic exp 68 1326 smooth_mwp1rsub-18-ses-2_T1w_SS.nii
19 classic exp 64 1448 smooth_mwp1rsub-19-ses-2_T1w_SS.nii
20 classic exp 68 1436 smooth_mwp1rsub-20-ses-2_T1w_SS.nii
21 classic exp 71 1549 smooth_mwp1rsub-21-ses-2_T1w_SS.nii
22 classic exp 66 1428 smooth_mwp1rsub-22-ses-2_T1w_SS.nii
26 classic exp 68 1735 smooth_mwp1rsub-26-ses-2_T1w_SS.nii
27 control exp 69 1409 smooth_mwp1rsub-27-ses-2_T1w_SS.nii
28 classic exp 68 1448 smooth_mwp1rsub-28-ses-2_T1w_SS.nii
29 control exp 65 1611 smooth_mwp1rsub-29-ses-2_T1w_SS.nii
30 virtual exp 68 1531 smooth_mwp1rsub-30-ses-2_T1w_SS.nii
32 virtual exp 67 1588 smooth_mwp1rsub-32-ses-2_T1w_SS.nii
33 virtual exp 64 1366 smooth_mwp1rsub-33-ses-2_T1w_SS.nii
34 virtual exp 64 1434 smooth_mwp1rsub-34-ses-2_T1w_SS.nii
36 virtual exp 59 1285 smooth_mwp1rsub-36-ses-2_T1w_SS.nii
37 virtual exp 71 1416 smooth_mwp1rsub-37-ses-2_T1w_SS.nii
38 classic exp 65 1252 smooth_mwp1rsub-38-ses-2_T1w_SS.nii
41 classic exp 71 1470 smooth_mwp1rsub-41-ses-2_T1w_SS.nii
50 control exp 72 1439 smooth_mwp1rsub-50-ses-2_T1w_SS.nii
52 control exp 71 1394 smooth_mwp1rsub-52-ses-2_T1w_SS.nii
53 control exp 68 1237 smooth_mwp1rsub-53-ses-2_T1w_SS.nii
55 virtual exp 69 1466 smooth_mwp1rsub-55-ses-2_T1w_SS.nii
57 classic exp 68 1548 smooth_mwp1rsub-57-ses-2_T1w_SS.nii
58 control exp 65 1536 smooth_mwp1rsub-58-ses-2_T1w_SS.nii
59 control exp 71 1602 smooth_mwp1rsub-59-ses-2_T1w_SS.nii
60 virtual exp 68 1409 smooth_mwp1rsub-60-ses-2_T1w_SS.nii
61 control exp 64 1442 smooth_mwp1rsub-61-ses-2_T1w_SS.nii
64 control exp 53 1365 smooth_mwp1rsub-64-ses-2_T1w_SS.nii
65 control exp 65 1482 smooth_mwp1rsub-65-ses-2_T1w_SS.nii
66 control exp 64 1651 smooth_mwp1rsub-66-ses-2_T1w_SS.nii
68 control exp 58 1390 smooth_mwp1rsub-68-ses-2_T1w_SS.nii
69 classic exp 69 1400 smooth_mwp1rsub-69-ses-2_T1w_SS.nii
72 control exp 58 1379 smooth_mwp1rsub-72-ses-2_T1w_SS.nii
74 control exp 66 1456 smooth_mwp1rsub-74-ses-2_T1w_SS.nii

Many thanks in advance,
Michal
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Subject Author Posted

3dMVM dataTable issue

lavr August 16, 2018 03:54PM

Re: 3dMVM dataTable issue

Colm Connolly August 20, 2018 02:04PM

Re: 3dMVM dataTable issue

lavr August 21, 2018 08:38AM

Re: 3dMVM dataTable issue

gang August 21, 2018 11:03AM