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October 11, 2018 09:57AM
Hi AFNI/SUMA users:

I'm having problems running: @SUMA_Make_Spec_FS -NIFTI -sid subject1
I am using macOS Sierra 10.12.5.

When I run this, it creates SUMA folder and start adding files in the folder. At some point it stops with the following message:
...
writing to /Applications/freesurfer/subjects/TacFreqEnc01/./SUMA/wm.seg.nii...
-- running 'mris_convert lh.smoothwm lh.smoothwm.asc'
Abort
dyld: lazy symbol binding failed: Symbol not found: ___emutls_get_address
Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib
Expected in: /usr/lib/libSystem.B.dylib

dyld: Symbol not found: ___emutls_get_address
Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib
Expected in: /usr/lib/libSystem.B.dylib

dyld: lazy symbol binding failed: Symbol not found: ___emutls_get_address
Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib
Expected in: /usr/lib/libSystem.B.dylib

dyld: Symbol not found: ___emutls_get_address
Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib
Expected in: /usr/lib/libSystem.B.dylib

Abort
c_ras: Subscript out of range.
c_ras: Subscript out of range.


I tried several options recommended from previous posts, including the ones here:
[mail.nmr.mgh.harvard.edu]
[afni.nimh.nih.gov]

None of them worked. Any recommendation is highly appreciated!

Thanks in advance!



Edited 1 time(s). Last edit at 10/11/2018 10:00AM by swallowwly.
Subject Author Posted

Error using @SUMA_Make_Spec_FS

swallowwly October 11, 2018 09:57AM

Re: Error using @SUMA_Make_Spec_FS

ptaylor October 11, 2018 10:01AM

Re: Error using @SUMA_Make_Spec_FS

swallowwly October 11, 2018 11:22AM

Re: Error using @SUMA_Make_Spec_FS

ptaylor October 11, 2018 03:10PM

Re: Error using @SUMA_Make_Spec_FS

swallowwly October 11, 2018 03:51PM



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