We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
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The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
It should be very bad to run 3dDetrend before motion correction
and other registration. That program would remove tissue contrast
and make motion correction very difficult.
Consider using afni_proc.py (maybe example 9) to start with for
resting state analysis.