Hi,
I am running into an issue with a dataset where the anatomical and EPI planes do not match-up. For example, when overlayed, the EPI's sagital plane overlays the horizontal plane, and the data face different directions. This is likely due to the EPI being collected using spiral acquisition.
The left/right I have corrected using 3dLRflip. Is there any way to change the planes of the data? Any help would be much appreciated..
Thanks