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January 11, 2019 02:55PM
Hello AFNI Experts,

I plan to merge DTI and resting state data. I will have resting state ICA networks guide the DTI tractography analysis.

I was planning to feed in the group ICA maps generated from Group Melodic in FSL into 3dROIMaker.

However, there are a lot of options to choose from in 3dROImaker and was unsure how to optimize. I was not sure what thresholding parameters to do, inflation amounts, etc. I was wondering if anyone had any advice on optimizing 3dROImaker for this particular scenario?

Also, the group melodic map has 30 components. Is there somewhere in 3dROImaker where I can select the component that I will run 3dROImaker on? Or will I need to separate out the components?

I would appreciate any advice to help get me started!

Subject Author Posted


Emily January 11, 2019 02:55PM

Re: 3dROIMaker

ptaylor January 11, 2019 04:08PM

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