AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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March 15, 2019 04:28PM
This little script takes 7 inputs - the name of the input dataset, an initial point in xyz RAI coordinates, and an ending point also in xyz RAI coordinates. You should get a line between the points at the grid of the input dataset. There may be only one voxel in any particular image slice. If you want a sphere down at each voxel instead of single voxel, use the -srad option for a default radius. Alternatively, add a fourth and fifth column to the text file with a value and a radius, meaning put a sphere down of radius and specified value.

x y z val radius

If you reduce the step size (and take more steps), then you will get something like a cylinder with rounded ends.



Edited 1 time(s). Last edit at 03/18/2019 04:17PM by Daniel Glen.
Subject Author Posted

How to draw ROIs in the volume?

jiaxin March 12, 2019 06:38AM

Re: How to draw ROIs in the volume?

Daniel Glen March 13, 2019 11:46PM

Re: How to draw ROIs in the volume?

jiaxin March 15, 2019 12:56AM

Re: How to draw ROIs in the volume?

Daniel Glen March 15, 2019 04:28PM

Re: How to draw ROIs in the volume?

jiaxin April 03, 2019 08:28AM

Re: How to draw ROIs in the volume?

Daniel Glen April 03, 2019 03:30PM