AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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April 22, 2019 01:46PM
Hi there!
Will be grateful for your advice and I believe you will know the answer.
I have two sets of data from two separate scans. The previous scan I used the Bold data in +orig space I got from preprocessing the data and I used this in a deconvolution along with a mask I obtained from 3dAutomask on the preprocessed data. The resulting SPMs were then laid on top of the tlrc anatomy with excellent fit. We did a second scan on the same person at a later date and tried to analyze the same way but this time using the tlrc volume from the first scan since we didn't collect a second volume because we thought we could get away with using the +tlrc Volume from the first. They didn't overlay well and the masks from each were very different. My question is is there an accurate way to overlay the second scan +orig data onto the second scan +tlrc volume and how would I do that?
I would appreciate your advice.
Thanks,
-Linda
Subject Author Posted

coregistering a new epi onto an old anatomy

heiding66 April 22, 2019 01:46PM

Re: coregistering a new epi onto an old anatomy

Daniel Glen April 22, 2019 01:49PM

Re: coregistering a new epi onto an old anatomy

heiding66 April 22, 2019 02:08PM

Re: coregistering a new epi onto an old anatomy

heiding66 April 23, 2019 10:07AM

Re: coregistering a new epi onto an old anatomy

Daniel Glen April 23, 2019 02:06PM