AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 15, 2019 09:40AM
If you continue to struggle, you may need to try doing some hand alignment first before allowing 3dAllineate/align_epi_anat.py to work their magic. I've written up some instructions here. It closely follows the methods we used to perform with ANTs, just with AFNI tools.
Subject Author Posted

alignment and standardization of 4 functional slices

ns May 13, 2019 03:56PM

Re: alignment and standardization of 4 functional slices

Daniel Glen May 13, 2019 05:58PM

Re: alignment and standardization of 4 functional slices

ns May 15, 2019 09:22AM

Re: alignment and standardization of 4 functional slices

Peter Molfese May 15, 2019 09:40AM