AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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ptaylor
June 18, 2019 09:05AM
Howdy-

You can add either of these options to suppress the commented text descriptions, and only output numbers (from the 3dClusterize help): 
-nosum         :Suppress printout of the totals
 
 -quiet         :Suppress all non-essential output

Note that even if you don't use the -quiet option, you can use 1dcat to dump the text from a file excluding the commented stuff-- this might be my vote, because you can have an output text file with commented description, file info, etc., but still get just the numbers out from, rather than losing all that lovely descriptive info.

Summary:
To just get numbers, you could do: 
3dClusterize -quiet ...  > Cluster_numbers_only.1D
*or*, you could do this and have the best of both worlds: 
3dClusterize ...  > Cluster_full_table.1D
1dcat Cluster_full_table.1D > Cluster_numbers_only.1D

--pt
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Subject Author Posted

3dclusterize > .txt

Dxc536 June 18, 2019 08:45AM

Re: 3dclusterize > .txt

rick reynolds June 18, 2019 09:01AM

Re: 3dclusterize > .txt

Dxc536 June 21, 2019 12:30PM

Re: 3dclusterize > .txt

ptaylor June 18, 2019 09:05AM

Re: 3dclusterize > .txt

Dxc536 June 21, 2019 12:30PM

Re: 3dclusterize > .txt

discoraj June 28, 2019 10:12AM