AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
June 18, 2019 05:12PM
Hi,

Please see the following code and error message, Please help me to fix it

cd /home/mcsa/Documents/t-test_data
3dMVM -prefix GLM.nii -jobs 4 \
-bsVars 'Diag*Age*Gender*Edu*MMSE*ICV' \
-SS_type 3 \
-num_glt 1 \
-gltLabel 1 CNvsCI -gltCode 1 'Diag : 1*CN -1*CI' \
-dataTable \
subj Diag Age Gender Edu MMSE ICV InputFile \
CI_01 CI 44 M 12 17 1607 ./CC013EH.nii \
CI_02 CI 60 M 8 23 1774 ./CC025NM.nii \
CI_03 CI 66 F 12 23 1254 ./NI9046DW.nii \
CI_04 CI 70 M 14 23 1630 ./NI9059GT.nii \
CI_05 CI 77 M 15 24 1656 ./NI020R.nii \
CI_06 CI 78 F 18 23 1330 ./NI9013SB.nii \
CI_07 CI 50 F 12 18 1579 ./CC001JG.nii \
CI_08 CI 70 F 14 20 1245 ./MRT73.nii \
CI_09 CI 61 M 15 14 1597 ./CC023GD.nii \
CI_10 CI 64 F 20 15 1561 ./MRT76.nii \
CI_11 CI 66 M 14 11 1557 ./NI015R.nii \
CN_01 CN 75 F 20 29 1513 ./NI9028NC.nii \
CN_02 CN 75 M 16 29 1573 ./NI001.nii \
CN_03 CN 74 M 20 29 1511 ./NI012.nii \
CN_04 CN 73 F 13 29 1465 ./NI9103PS.nii \
CN_05 CN 72 F 18 30 1521 ./NI014R.nii \
CN_06 CN 72 M 15 30 1559 ./NI9065BT.nii \
CN_07 CN 71 F 18 28 1639 ./NI008R.nii \
CN_08 CN 71 F 15 30 1550 ./NI9039HG.nii \
CN_09 CN 70 F 11 28 1443 ./NI9076MM.nii \
CN_10 CN 70 F 18 30 1320 ./NI017.nii \
CN_11 CN 70 F 13 28 1453 ./NI9126LL.nii

Attaching package: ‘afex’

The following object is masked from ‘package:lme4’:

lmer

Loading required package: car
Loading required package: carData
Error in `$<-.data.frame`(`*tmp*`, Subj, value = integer(0)) :
replacement has 0 rows, data has 22
Calls: $<- -> $<-.data.frame
Execution halted
Subject Author Posted

3dMVM error

mniqureshi June 18, 2019 05:12PM

Re: 3dMVM error

gang June 19, 2019 11:41AM

Re: 3dMVM error

Naveed June 19, 2019 04:39PM

Re: 3dMVM error

gang June 20, 2019 05:23PM