AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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March 12, 2021 10:14PM
Dear AFNI experts,

Thanks for helping me with troubleshooting.

I successfully ran 3dlmer with 108 individuals. However, I have to exclude 1 participant due to the normalization failure I noticed now.

So, I tried to rerun 3dlmer with 107 participants with this command.

3dLMEr -prefix MyOutputName -jobs 12 \
-mask mask_group+tlrc \
-model ‘A*B*C*D+E+(1+A+B|Subj)' \
-bounds -2 2 \
-qVars ‘C,D,E’ \
-dataTable \

However, I was faced with this error message.

Z slice 1 done: 03/12/21 18:57:12.447
Z slice 2 done: 03/12/21 18:57:12.694
Z slice 3 done: 03/12/21 18:57:13.106
Error in checkForRemoteErrors(val) :
2 nodes produced errors; first error: missing value where TRUE/FALSE needed
Calls: aperm ... clusterApply -> staticClusterApply -> checkForRemoteErrors
Execution halted


I didn’t get this message
when I ran with 108 participants with mask_group+tlrc or
ran with 107 participants with ROI mask (e.g., MPFC anatomical mask) or
ran with 107 participants with mask_group+tlrc using 3dMVM (rathe than 3dLMEr)

Greatly appreciate any help in solving this error.

Thanks!
Irene
Subject Author Posted

Error in checkForRemoteErrors(val)

Leehyun Yoon March 12, 2021 10:14PM

Re: Error in checkForRemoteErrors(val)

gang March 14, 2021 10:57AM

Re: Error in checkForRemoteErrors(val)

Leehyun Yoon March 26, 2021 05:07PM