AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
August 23, 2019 12:01PM
Gang,

I've been running RBA as follows:
	if [[ ${laterality} == "unilateral" ]] ; then
	    graphLayout="3 6"
	elif [[ ${laterality} == "unilateral" ]] ; then
	    graphLayout="4 5"	
	fi
   RBA \
		 -prefix ${laterality}.${glt}.rba \
		 -chains 4 -iterations 1000 \
		 -PDP ${graphLayout} \
		 -Subj Subj -ROI ROI -Y contrast \
		 -cVars "group" \
		 -model "1+group" \
		 -EOI 'Intercept,group' \
		 -dataTable ../${dataTableFilename} > rba_results.txt 2>&1
The group factor has two levels C and M. One thing I noticed is that in the Intercept.pdf file the graphs are all labelled with the ROI name. The same can't be said for the group and C-M pdfs they are both absent the ROI labels. is this a bug?
Subject Author Posted

Two group analyses with BayesianGroupAna.py possible?

Colm Connolly August 09, 2019 11:57AM

Re: Two group analyses with BayesianGroupAna.py possible?

gang August 09, 2019 01:44PM

Re: Two group analyses with BayesianGroupAna.py possible?

Colm Connolly August 09, 2019 02:07PM

Re: Two group analyses with BayesianGroupAna.py possible?

gang August 09, 2019 05:35PM

Re: Two group analyses with BayesianGroupAna.py possible?

Colm Connolly August 23, 2019 12:01PM

Re: Two group analyses with BayesianGroupAna.py possible?

gang August 23, 2019 03:26PM