AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 18, 2019 06:39PM
I am modeling a task with a mixed block event-related design. It has four block conditions (negative vs. neutral images with predictable vs. unpredictable presentation timings). Blocks are 91 s long, and there are two blocks of each condition type. I modeled these blocks with the BLOCK function, and found some interesting differences within a couple of ROIs.

Now I would like to graph the timecourse of these blocks for each condition, to see if there is anything notable about the response profiles within the ROIs (i.e. is there a big initial activation that tapers off before the block ends, or is it sustained throughout the block). What is the best way to do this? Should I rerun 3ddeconvolve using a tent function (for example, TENT(0,91,15) to get estimates of activation across 15 time windows within the block)? Or should I take the relevant 91 s for each block in the fitts file, and then average the 2 repetitions of the block conditions together? Or perhaps use 3synthesize to extract fit for each condition regressor individually?

Thanks!



Edited 1 time(s). Last edit at 09/18/2019 06:45PM by wped.
Subject Author Posted

Graph activity within blocks

wped September 18, 2019 06:39PM

Re: Graph activity within blocks

gang September 19, 2019 11:25AM

Re: Graph activity within blocks

wped September 19, 2019 11:50AM

Re: Graph activity within blocks

gang September 19, 2019 12:05PM

Re: Graph activity within blocks

wped September 19, 2019 12:14PM

Re: Graph activity within blocks

gang September 19, 2019 01:29PM