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January 09, 2020 12:01PM
Yue,

It seems that you have a dataset with a 2 x 2 within-subject (or repeated-measures) ANOVA structure. There are multiple ways to build a model, especially when there is no missing data.

> I am mostly interested in the interaction effect between factor a & b.

1) If you are ONLY interested in the interaction effect between the two factor, you can obtain the interaction effect for each subject, and then perform a one-sample t-test with 3dttest++.

2) Perform a 2 x 2 ANOVA with 3dANOVA3 -type 4 or with 3dMVM

3) If you want to use 3dLMEr, make sure you have the most recent version of AFNI. And try

3dLMEr ... -model "MOD+WORD+(1|Subj)" \
(there is no option -ICCb in 3dLMEr)

Gang
Subject Author Posted

New program 3dLMEr for linear mixed-effects modeling

Gang December 30, 2019 10:58AM

Re: New program 3dLMEr for linear mixed-effects modeling

Yue January 08, 2020 05:22PM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang January 09, 2020 12:01PM

Re: New program 3dLMEr for linear mixed-effects modeling

Yue January 14, 2020 11:15AM

Re: New program 3dLMEr for linear mixed-effects modeling

Andrew Davis April 24, 2020 01:11PM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang April 24, 2020 02:39PM

Re: New program 3dLMEr for linear mixed-effects modeling

Andrew Davis April 25, 2020 11:46AM

Re: New program 3dLMEr for linear mixed-effects modeling

Andrew Davis April 30, 2020 04:02PM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang April 30, 2020 05:53PM

Re: New program 3dLMEr for linear mixed-effects modeling

Andrew Davis April 30, 2020 09:07PM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang May 01, 2020 02:42PM

Re: New program 3dLMEr for linear mixed-effects modeling

Andrew Davis May 02, 2020 12:12PM

Re: New program 3dLMEr for linear mixed-effects modeling

ben88 August 03, 2020 07:53PM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang August 04, 2020 07:53AM

Re: New program 3dLMEr for linear mixed-effects modeling

ben88 August 04, 2020 08:14AM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang August 04, 2020 08:59AM

Re: New program 3dLMEr for linear mixed-effects modeling

ben88 August 12, 2020 04:33PM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang August 13, 2020 02:36PM

Re: New program 3dLMEr for linear mixed-effects modeling

aojha17 September 14, 2020 10:56AM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang September 14, 2020 02:13PM

Re: New program 3dLMEr for linear mixed-effects modeling

aojha17 September 18, 2020 07:32PM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang September 21, 2020 08:31PM

Re: New program 3dLMEr for linear mixed-effects modeling

aojha17 September 22, 2020 03:41PM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang September 22, 2020 04:00PM

Re: New program 3dLMEr for linear mixed-effects modeling

aojha17 September 22, 2020 09:01PM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang September 23, 2020 10:09AM

Re: New program 3dLMEr for linear mixed-effects modeling

aojha17 September 23, 2020 11:21AM

Re: New program 3dLMEr for linear mixed-effects modeling

henrybrice October 20, 2020 09:06AM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang October 20, 2020 12:31PM

Re: New program 3dLMEr for linear mixed-effects modeling

henrybrice October 20, 2020 03:22PM

Re: New program 3dLMEr for linear mixed-effects modeling

Gang October 20, 2020 09:05PM

Re: New program 3dLMEr for linear mixed-effects modeling

henrybrice October 21, 2020 05:43AM



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