Hi,
I've got some Enhanced MR images that are coming through flipped I-S after to3d.
I can fix the anatomic series by including the -oblique_origin flag. The fMRI and DTI series remain flipped even if I use that flag.
These are from a Siemens Vida 3T scanner. What is the best solution for using Enhanced MR formatted images with AFNI? Will changing the acquisition direction make a difference?
Many Thanks,
-Chad