AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 16, 2020 11:38AM
Hi,

I've got some Enhanced MR images that are coming through flipped I-S after to3d.

I can fix the anatomic series by including the -oblique_origin flag. The fMRI and DTI series remain flipped even if I use that flag.

These are from a Siemens Vida 3T scanner. What is the best solution for using Enhanced MR formatted images with AFNI? Will changing the acquisition direction make a difference?

Many Thanks,
-Chad
Subject Author Posted

Enhanced MR Images Flipped

Chad N January 16, 2020 11:38AM

Re: Enhanced MR Images Flipped

Chad N January 21, 2020 02:56PM

Re: Enhanced MR Images Flipped

Daniel Glen January 21, 2020 07:48PM

Re: Enhanced MR Images Flipped

Chad N January 27, 2020 11:07AM