AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 21, 2020 02:24PM
Hi Geena,

Yes, the modern one just applies the modern version of make_random_timing.py.

I would think that in your case, the modern version might still be reasonable to apply, as you would be able to specify the min/mean/max of the ITIs, which would presumably tend to be long.

The created 3dDeconvolve script will use BLOCK, but you might just pipe that through a "sed" command to convert BLOCK(A,1) (for whichever A) to the appropriate MION response function.

Try setting that up as you see fit, and then I can comment more directly on the commands you are trying. If you also post the -stim_times lines of the 3dDeconvolve command, along with your preferred MION function, I can suggest how to convert it.

- rick
Subject Author Posted

@stim_analyze & modern version

geenaianni January 20, 2020 03:09PM

Re: @stim_analyze & modern version

rick reynolds January 21, 2020 02:24PM

Re: @stim_analyze & modern version

geenaianni January 24, 2020 04:13PM

Re: @stim_analyze & modern version

rick reynolds January 27, 2020 10:54AM

Re: @stim_analyze & modern version

rick reynolds January 27, 2020 01:34PM

Re: @stim_analyze & modern version

geenaianni January 27, 2020 03:54PM

Re: @stim_analyze & modern version

rick reynolds January 28, 2020 09:29AM