AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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July 08, 2020 10:02AM
Hello AFNI experts!!

I am having an issue with my fMRI data. I found that when I do 3dinfo -slice_timing in my EPI images the timing is "0". We found a solution to "called back" the slice timing information 3dTcat  topup_corrected_Rest.nii -tpattern alt+z -prefix EPI_fixed.nii which seems to work. But when I want to use this “fixed” data, and do, for example 3dTshift, the slice timing is again reset to “0”.

Do you have any suggestions on how to address this?
Subject Author Posted

slice_timing

LuisaBoh July 08, 2020 10:02AM

Re: slice_timing

LuisaBoh July 08, 2020 10:09AM

Re: slice_timing

rick reynolds July 08, 2020 10:16AM

Re: slice_timing

LuisaBoh July 08, 2020 10:49AM