Dear AFNI experts,
I just tested the new version of animal_warper. Everything works fine, but I just find something not normal when the bain mask is produced at the end. I guess it is based on the skullstriped anatomical image in the template space that is sent back into the subject space? It seems that the mask is cut when compared to the previous version. In consequence, in macaque, I am losing a few parts of the cerebellum and of the inferior temporal cortex.
Any logical reason for that? Is there a way to correct it?
Thank you!
Clem
