AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 27, 2020 11:48AM
I downloaded afni on windows (wsl) using the steps given on the afni website and i still see 256 and 257. This is the comment i get.

3dmask_tool -input bin_rest_binarized*+orig.HEAD -prefix mask_inter -frac 1.0
++ processing 28 input dataset(s), NN=2...
++ padding all datasets by 0 (for dilations)
++ frac 1 over 28 volumes gives min count 28
++ voxel limits: 238386 clipped, 183 survived, 664060 were zero
++ writing result mask_inter...

But there is a very big difference. When running on OSC server i get the following results as statistics :

0 1 256 257
655015 9466 9514 228634

whereas on afni on my computer i get :

0 1 256 257
902285 178 162 4

This is with the same files.
Subject Author Posted

3dmask_tool : different solutions using HEAD and BRIK and values 256 and 257 appearing

prateeksasan1 September 24, 2020 05:55PM

Re: 3dmask_tool : different solutions using HEAD and BRIK and values 256 and 257 appearing

ptaylor September 24, 2020 09:13PM

Re: 3dmask_tool : different solutions using HEAD and BRIK and values 256 and 257 appearing

prateeksasan1 September 25, 2020 10:47AM

Re: 3dmask_tool : different solutions using HEAD and BRIK and values 256 and 257 appearing

prateeksasan1 September 27, 2020 11:48AM

Re: 3dmask_tool : different solutions using HEAD and BRIK and values 256 and 257 appearing

ptaylor September 27, 2020 03:16PM

Re: 3dmask_tool : different solutions using HEAD and BRIK and values 256 and 257 appearing

rick reynolds September 29, 2020 12:16PM

Re: 3dmask_tool : different solutions using HEAD and BRIK and values 256 and 257 appearing

prateeksasan1 October 05, 2020 03:48PM

Re: 3dmask_tool : different solutions using HEAD and BRIK and values 256 and 257 appearing

ptaylor October 05, 2020 04:46PM