AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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BrainFood
October 16, 2020 09:46PM
Thanks Gang. I installed 'phia' (actually, ran rPkgsInstall -pkgs ALL), but now a new error looking for package 'data.table'. I did some digging but am not clear on how to fix. Thanks very much for any input!

updating R_LD_LIBRARY_PATH ...
Loading required package: nlme
Package nlme loaded successfully!

Loading required package: phia
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘data.table’
Failed with error: ‘package ‘car’ could not be loaded’

++++++++++++++++++++++++++++++++++++++++++++++++++++
***** Summary information of data structure *****
20 subjects : s307 s309 s321 s323 s324 s325 s326 s327 s328 s329 s330 s331 s332 s333 s334 s335 s338 s339 s340 s342
54 response values
3 levels for factor diet : baseline lowcarb lowfat
6 post hoc tests

Contingency tables of subject distributions among the categorical variables:


Tabulation of subjects against all categorical variables
~~~~~~~~~~~~~~
Subj vs diet:

baseline lowcarb lowfat
s307 1 1 1
s309 1 1 1
s321 1 1 1
s323 1 1 1
s324 1 0 1
s325 1 1 0
s326 1 1 1
s327 1 1 1
s328 1 1 1
s329 1 1 1
s330 1 1 1
s331 1 1 1
s332 1 1 0
s333 1 0 0
s334 1 1 1
s335 1 1 1
s338 1 1 1
s339 1 1 1
s340 1 0 1
s342 1 1 1
***** End of data structure information *****
++++++++++++++++++++++++++++++++++++++++++++++++++++

Reading input files now...

Reading input files: Done!


Range of input data: [-3.906, 6.055]

If the program hangs here for more than, for example, half an hour,
kill the process because the model specification or the GLT coding
is likely inappropriate.

Error in xinit : object 'xinit' not found
Execution halted
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Subject Author Posted

3dLME error: "Error in xinit : object 'xinit' not found

BrainFood October 14, 2020 11:55AM

Re: 3dLME error: "Error in xinit : object 'xinit' not found

gang October 14, 2020 04:16PM

Re: 3dLME error: "Error in xinit : object 'xinit' not found

BrainFood October 16, 2020 09:46PM

Re: 3dLME error: "Error in xinit : object 'xinit' not found

gang October 17, 2020 08:50AM