AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Doughboys
October 22, 2020 11:14AM
Problem solved,
the program died with 

3dDeconvolve -input pb05.imapt1s080.r01.scale+orig.HEAD -mask full_mask.imapt1s080+orig -ortvec motion_demean.1D mot_demean -ortvec motion_deriv.1D mot_deriv -polort 4399 -float -num_stimts 0 -fout -tout -x1D X.xmat.1D -xjpeg X.jpg -fitts fitts.imapt1s080 -errts errts.imapt1s080 -x1D_stop -bucket stats.imapt1s080
++ 3dDeconvolve extending num_stimts from 0 to 12 due to -ortvec
++ 3dDeconvolve: AFNI version=AFNI_20.2.15 (Aug 28 2020) [64-bit]
++ Authored by: B. Douglas Ward, et al.
++ Skipping check for initial transients
++ Input polort=4399; Longest run=659814.0 s; Recommended minimum polort=4399 ++ OK ++
++ Number of time points: 277 (no censoring)
 + Number of parameters:  4412 [4412 baseline ; 0 signal]
** ERROR: Regression model has too many parameters for dataset length :(
** FATAL ERROR: 3dDeconvolve dies: Insufficient data (277) for estimating 4412 parameters
** Program compile date = Aug 28 2020

It seems that the TR was in ms instate of s...
for future people that might have the same problem: 

3drefit -TR 2.382 dset_func

I just have my last question left concerning mALFF,
thank you!

Clément
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Subject Author Posted

BOLD resolution for afni_proc.py

Doughboys October 20, 2020 05:22PM

Re: BOLD resolution for afni_proc.py

Doughboys October 22, 2020 11:14AM

Re: BOLD resolution for afni_proc.py

ptaylor October 22, 2020 11:36AM

Re: BOLD resolution for afni_proc.py

ptaylor October 22, 2020 11:35AM

Re: BOLD resolution for afni_proc.py

Doughboys October 22, 2020 02:04PM

Re: BOLD resolution for afni_proc.py

ptaylor October 22, 2020 04:14PM

Re: BOLD resolution for afni_proc.py

Doughboys October 22, 2020 04:53PM

Re: BOLD resolution for afni_proc.py

ptaylor October 22, 2020 06:00PM

Re: BOLD resolution for afni_proc.py

Doughboys October 28, 2020 02:44PM

Re: BOLD resolution for afni_proc.py

ptaylor October 28, 2020 04:04PM

Re: BOLD resolution for afni_proc.py

Doughboys October 29, 2020 09:02PM