AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 12, 2021 09:24AM
> Is there any method to plot coefficient, SD/SE of this effect '-gltCode ... 'CiJi : 1*anode QainHou : 1*after Contrast3 : 1*now'?

Each post hoc inference through -gltCode gives you two values per voxel: effect estimate and t-statistic. You can directly obtain the standard error (dividing effect estimate by t-statistic). Once you have the standard error, I think there is a way to plot the result at the voxel level although I don't know the detail on the AFNI GUI. For ROI-level plotting, do it with a graphical tool after extracting the resutls.

Gang
Subject Author Posted

3dLME for scatter plot

charujing123 January 10, 2021 04:20AM

Re: 3dLME for scatter plot

gang January 10, 2021 08:47AM

Re: 3dLME for scatter plot

charujing123 January 10, 2021 08:30PM

Re: 3dLME for scatter plot

gang January 11, 2021 12:57PM

Re: 3dLME for scatter plot

charujing123 January 11, 2021 07:56PM

Re: 3dLME for scatter plot

gang January 12, 2021 09:24AM

Re: 3dLME for scatter plot

charujing123 January 12, 2021 09:35PM

Re: 3dLME for scatter plot

gang January 13, 2021 07:40AM

Re: 3dLME for scatter plot

charujing123 January 13, 2021 09:02PM

Re: 3dLME for scatter plot

charujing123 January 15, 2021 08:40PM

Re: 3dLME for scatter plot

gang January 16, 2021 10:28PM

Re: 3dLME for scatter plot

charujing123 January 17, 2021 05:17AM