AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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LTT
January 19, 2021 03:28PM
I am trying to analyze the UCLA Consortium for Neuropsychiatric Phenomics LA5c Study dataset (https://openneuro.org/datasets/ds000030/versions/1.0.0). Before starting my analyses, I updated afni binaries (as of today, 19.01.2021). After running my script, no QC folder can be found and the terminal reports:
if ( -e @ss_review_basic ) then
./@ss_review_basic
tee out.ss_review.sub-10159_taskswitch.txt
./@ss_review_basic: Permission denied.
I tried running
afni -ver
which tcsh
ls -l @ss_review_basic
head -n 3 @ss_review_basic
and this is the result
Precompiled binary linux_ubuntu_16_64: Jan 18 2021 (Version AFNI_21.0.04 'Titus')
/usr/bin/tcsh
ls: cannot access '@ss_review_basic': No such file or directory
head: cannot open '@ss_review_basic' for reading: No such file or directory
I ran @update.afni.binaries -d, but the binaries seem indeed to be aligned to the latest version.
I am running Ubuntu 20.04.1 LTS Focal Fossa hosted on Oracle VM VirtualBox 6.1.16 r140961 (Qt5.6.2)

Livio Tarchi,
from University of Pavia
Subject Author Posted

@ss_review_basic: Permission denied

LTT January 19, 2021 03:28PM

Re: @ss_review_basic: Permission denied

ptaylor January 19, 2021 03:43PM

Re: @ss_review_basic: Permission denied

LTT January 20, 2021 07:13AM

Re: @ss_review_basic: Permission denied

ptaylor January 20, 2021 08:50AM