AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 03, 2021 10:04AM
I am new to using ETAC in 3dttest++ and I have a question about the hpow value. In a dataset I'm currently analyzing, when hpow is set to 0, I get cluster activity that makes sense and is in line with what -Clustsim in 3dttest++ gives me, but when hpow is set to 1 or 2, no voxels pass the correction. Could someone help me to wrap my head around what that means? I've pasted my full 3dttest++ command below and I'd appreciate any insight into how to interpret this.

Thanks in advance!

3dttest++ -setA Int \
sub001 stats.sb21730_REML+tlrc.'[44]' \
sub002 stats.sb21750_REML+tlrc.'[44]' \
sub003 stats.sb21767_REML+tlrc.'[44]' \
sub004 stats.sb21824_REML+tlrc.'[44]' \
sub005 stats.sb21826_REML+tlrc.'[44]' \
sub006 stats.sb21827_REML+tlrc.'[44]' \
sub007 stats.sb21838_REML+tlrc.'[44]' \
sub008 stats.sb21840_REML+tlrc.'[44]' \
sub009 stats.sb21843_REML+tlrc.'[44]' \
sub010 stats.sb21847_REML+tlrc.'[44]' \
sub011 stats.sb21858_REML+tlrc.'[44]' \
sub012 stats.sb21862_REML+tlrc.'[44]' \
sub013 stats.sb21866_REML+tlrc.'[44]' \
sub014 stats.sb21873_REML+tlrc.'[44]' \
sub015 stats.sb21875_REML+tlrc.'[44]' \
sub016 stats.sb21876_REML+tlrc.'[44]' \
sub017 stats.sb21878_REML+tlrc.'[44]' \
sub018 stats.sb21889_REML+tlrc.'[44]' \
sub019 stats.sb22100_REML+tlrc.'[44]' \
sub020 stats.sb22104_REML+tlrc.'[44]' \
sub021 stats.sb22115_REML+tlrc.'[44]' \
sub022 stats.sb22122_REML+tlrc.'[44]' \
sub023 stats.sb22135_REML+tlrc.'[44]' \
sub024 stats.sb22144_REML+tlrc.'[44]' \
-prefix Int_Allhs -Etac -ETAC_opt NN=2:sid=2:hpow=0,2:pthr=0.01/0.001/19:name=hpow0:fpr=5 -ETAC_opt NN=2:sid=2:hpow=2,2:pthr=0.01/0.001/19:name=hpow2:fpr=5 -ETAC_opt NN=2:sid=2:hpow=2,2:pthr=0.01/0.001/19:name=hpow1:fpr=5 -mask group_mask+tlrc.HEAD
Subject Author Posted

hpow in ETAC

asali February 03, 2021 10:04AM

Re: hpow in ETAC

asali February 03, 2021 10:45AM

Re: hpow in ETAC

asali May 27, 2021 02:58PM