AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 03, 2021 10:45AM
I'm sorry for the double post. I just noticed a mistake I was making, but I'm still a bit confused. My 3dttest++ command above should have been the version I've pasted below. When I fixed this, I now have no voxels that pass the correction for hpow=0, hpow=1, or hpow=2 when tested separately. However, when I run -ETAC_opt NN=2:sid=2:hpow=0,1,2:pthr=0.01/0.001/19:name=all:fpr=5 I get clusters that pass the correction. The help page says there is little reason for including all three hpows in a single call. Could you please explain that more? Thanks again and I'm sorry for the confusion!

3dttest++ -setA Int \
sub001 stats.sb21730_REML+tlrc.'[44]' \
sub002 stats.sb21750_REML+tlrc.'[44]' \
sub003 stats.sb21767_REML+tlrc.'[44]' \
sub004 stats.sb21824_REML+tlrc.'[44]' \
sub005 stats.sb21826_REML+tlrc.'[44]' \
sub006 stats.sb21827_REML+tlrc.'[44]' \
sub007 stats.sb21838_REML+tlrc.'[44]' \
sub008 stats.sb21840_REML+tlrc.'[44]' \
sub009 stats.sb21843_REML+tlrc.'[44]' \
sub010 stats.sb21847_REML+tlrc.'[44]' \
sub011 stats.sb21858_REML+tlrc.'[44]' \
sub012 stats.sb21862_REML+tlrc.'[44]' \
sub013 stats.sb21866_REML+tlrc.'[44]' \
sub014 stats.sb21873_REML+tlrc.'[44]' \
sub015 stats.sb21875_REML+tlrc.'[44]' \
sub016 stats.sb21876_REML+tlrc.'[44]' \
sub017 stats.sb21878_REML+tlrc.'[44]' \
sub018 stats.sb21889_REML+tlrc.'[44]' \
sub019 stats.sb22100_REML+tlrc.'[44]' \
sub020 stats.sb22104_REML+tlrc.'[44]' \
sub021 stats.sb22115_REML+tlrc.'[44]' \
sub022 stats.sb22122_REML+tlrc.'[44]' \
sub023 stats.sb22135_REML+tlrc.'[44]' \
sub024 stats.sb22144_REML+tlrc.'[44]' \
-prefix Int_CorrectedTogether -Etac -ETAC_opt NN=2:sid=2:hpow=0:pthr=0.01/0.001/19:name=h0:fpr=5 -ETAC_opt NN=2:sid=2:hpow=1:pthr=0.01/0.001/19:name=h1:fpr=5 -ETAC_opt NN=2:sid=2:hpow=2:pthr=0.01/0.001/19:name=h2:fpr=5 -mask group_mask+tlrc.HEAD
Subject Author Posted

hpow in ETAC

asali February 03, 2021 10:04AM

Re: hpow in ETAC

asali February 03, 2021 10:45AM

Re: hpow in ETAC

asali May 27, 2021 02:58PM