Hi AFNI support team,
I take the liberty of reaching out regarding an issue that I am facing when trying to install AFNI on my new machine under macOS Bis Sur (version 11.2). I have followed carefully each step described here "1.1.7. Mac OS" and after reviewing the message board for some hints about how to fix these issues, I am still stuck.
First, I got a message error at the step where I had to run the following command 'suma -update_env', whereas I completed each step described previously.
(base) Claudies-MBP:~ claudie$ suma -update_env
-bash: suma: command not found
Based on what I could find on the message board, I ran the following command line to set the path:
(base) Claudies-MBP:~ claudie$ export PATH=$PATH:~/abin
After setting the path, I ran again the following command and here is what I got:
(base) Claudies-MBP:~ claudie$ suma -update_env
dyld: Library not loaded: /opt/X11/lib/libXp.6.dylib
Referenced from: /Users/claudie/abin/suma
Reason: image not found
Abort trap: 6
I nevertheless rebooted my system and tried to move forward by (1) installing R-3.6.3 and (2) running the following command 'sudo rPkgsInstall -pkgs ALL'. Here is what I got.
(base) Claudies-MBP:~ claudie$ sudo rPkgsInstall -pkgs ALL
Password:
updating R_LD_LIBRARY_PATH ...
R: Command not found.
R: Command not found.
Did I miss something in the installation process?
Many thanks for your time and help!
Kind regards,
Claudie