Hi, Stef-
Ah I see, that is so. In the GUI, you can both set a voxelwise threshold and clusterize and have alpha+boxed on (the latter are switched on by clicking on the [A] and
buttons above the threshold slider). The image could be saved from the GUI directly.
At the moment, @chauffeur_afni doesn't combine both the voxelwise and clustering thresholding. That is probably something that could be added... though it might have to work in a slightly different way than GUI (it would be a close approximation).
--pt
Edited 1 time(s). Last edit at 09/11/2021 04:18PM by ptaylor.