AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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lenaoflynn
May 31, 2021 07:17PM
Hi again,

I tried adding the categorical covariate "benefit" in -bsVars and did not mention it in -qVars because it's categorical, but I get an Error saying: Quitting due to model test failure.

Attaching the 3dMVM code and data table. Interestingly, if I simply delete the benefit bsvars and let the model run with the the two qualitative covariates it runs without an issue. Would really appreciate any guidance!! Thanks!

3dMVM -prefix MVM_Group_Results_subtypes_benefit -jobs 1 \
-bsVars 'group+BTXTime+TotalBTX+Benefit' \
-qVars 'BTXTime,TotalBTX' \
-SS_type 3 \
-num_glt 1 \
-gltLabel 1 Non-Naive_AD_vs_Non-naive_AB -gltCode 1 'group : 1*BTX_nonnaive_AD -1*BTX_nonnaive_AB' \
-mask mask_resamp+tlrc. \
-dataTable @3dMVM_DataTable_subtypes_benefit.txt


Subj group BTXTime TotalBTX Benefit InputFile
s201 BTX_nonnaive_AB 3 3 yes stats.s201+tlrc[7]
s202 BTX_nonnaive_AD 3 36 yes stats.s202+tlrc[7]
s203 BTX_nonnaive_AD 3.5 57 no stats.s203+tlrc[7]
etc.
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Subject Author Posted

3dMVM qualitative covariate of no interest

lenaoflynn May 13, 2021 02:00PM

Re: 3dMVM qualitative covariate of no interest

gang May 13, 2021 10:15PM

Re: 3dMVM qualitative covariate of no interest

lenaoflynn May 14, 2021 10:00AM

Re: 3dMVM qualitative covariate of no interest

gang May 14, 2021 09:29PM

Re: 3dMVM qualitative covariate of no interest

lenaoflynn May 30, 2021 05:32PM

Re: 3dMVM qualitative covariate of no interest

lenaoflynn May 31, 2021 07:17PM

Re: 3dMVM qualitative covariate of no interest

gang June 01, 2021 01:02PM

Re: 3dMVM qualitative covariate of no interest

lenaoflynn June 01, 2021 06:28PM