AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 30, 2021 08:43AM
OK, there is no obliquity in the dsets, so that is not responsible for any alignment issues.

I assume that this alignment is the result of FMRIprep processing, but I am not familiar with how FMRIprep allows you to check the alignment. (In the afni_proc.py output QC HTML, there are separate images showing EPI to anatomical alignment, and also anatomical to template alignment, for any of those alignments that are performed).

--pt
Subject Author Posted

Fmriprep:how to match functional datasets with subject’s individual T1 space

Aaron_Chang May 14, 2021 11:26PM

Re: Fmriprep:how to match functional datasets with subject’s individual T1 space

ptaylor May 16, 2021 01:30PM

Re: Fmriprep:how to match functional datasets with subject’s individual T1 space

Aaron_Chang May 20, 2021 11:27PM

Re: Fmriprep:how to match functional datasets with subject’s individual T1 space

ptaylor May 24, 2021 05:38PM

Re: Fmriprep:how to match functional datasets with subject’s individual T1 space Attachments

Aaron_Chang May 27, 2021 11:27PM

Re: Fmriprep:how to match functional datasets with subject’s individual T1 space

ptaylor May 28, 2021 09:19AM

Re: Fmriprep:how to match functional datasets with subject’s individual T1 space

Aaron_Chang May 30, 2021 05:18AM

Re: Fmriprep:how to match functional datasets with subject’s individual T1 space

ptaylor May 30, 2021 08:43AM

Re: Fmriprep:how to match functional datasets with subject’s individual T1 space Attachments

Aaron_Chang May 30, 2021 10:21AM

Re: Fmriprep:how to match functional datasets with subject’s individual T1 space Attachments

ptaylor May 30, 2021 01:03PM