Hi pt,
Given the below feedback from the script, would you suggest I adjust my timing files using timing_tool.py first, before running afni_proc.py? i.e. Since a TR=2.0s, would subtracting 4.0s from each stimulus time be the way to go?
** warning: removing first 2 TRs from beginning of each run
--> the stimulus timing files must reflect the removal of these TRs
And thank you for your advice with the afni_proc.py script - it appears that the script worked and generated a final QC html page!
Yash