AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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yk40_
June 10, 2021 08:04AM
Hi pt,

Given the below feedback from the script, would you suggest I adjust my timing files using timing_tool.py first, before running afni_proc.py? i.e. Since a TR=2.0s, would subtracting 4.0s from each stimulus time be the way to go?

** warning: removing first 2 TRs from beginning of each run
--> the stimulus timing files must reflect the removal of these TRs

And thank you for your advice with the afni_proc.py script - it appears that the script worked and generated a final QC html page!


Yash
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Subject Author Posted

errors running afni_proc.py

yk40_ June 09, 2021 04:37PM

Re: errors running afni_proc.py

ptaylor June 09, 2021 05:17PM

Re: errors running afni_proc.py

yk40_ June 10, 2021 08:04AM

Re: errors running afni_proc.py

ptaylor June 10, 2021 06:41PM

Re: errors running afni_proc.py

yk40_ June 24, 2021 02:13PM