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July 12, 2021 01:25PM
Hi Peter,
Sorry I made a mistake of the tparttern info. It should be seqplus.
3dTcat -prefix test18 -tpattern seqplus S018.rs.nii
3dinfo -slice_timing test18+orig
Then I got
0.000000|0.055556|0.111111|0.166667|0.222222|0.277778|0.333333|0.388889|0.444445|0.500000|0.555556|0.611111|0.666667|0.722223|0.777778|0.833334|0.888889|0.944445|1.000000|1.055556|1.111112|1.166667|1.222223|1.277778|1.333334|1.388889|1.444445|1.500001|1.555556|1.611112|1.666667|1.722223|1.777779|1.833334|1.888890|1.944445|2.000001|2.055556|2.111112|2.166667|2.222223|2.277779|2.333334|2.388890|2.444445

But when open in AFNI graph. For the sagittal and coronal slices, in the first volumn, @t is supposed to be same as the slicing time. I need to do a time slicing correction to it then @t is corrected to be 0. Right?


Thanks.
Xiyue
Subject Author Posted

Add Time Slicing data to Nifti file

xiyuezh July 06, 2021 10:52AM

Re: Add Time Slicing data to Nifti file

Peter Molfese July 06, 2021 02:35PM

Re: Add Time Slicing data to Nifti file

xiyuezh July 06, 2021 05:26PM

Re: Add Time Slicing data to Nifti file

Peter Molfese July 07, 2021 10:05AM

Re: Add Time Slicing data to Nifti file

xiyuezh July 07, 2021 10:46AM

Re: Add Time Slicing data to Nifti file

Peter Molfese July 07, 2021 11:45AM

Re: Add Time Slicing data to Nifti file

xiyuezh July 08, 2021 09:51AM

Re: Add Time Slicing data to Nifti file

Peter Molfese July 08, 2021 10:43AM

Re: Add Time Slicing data to Nifti file

Peter Molfese July 08, 2021 11:29AM

Re: Add Time Slicing data to Nifti file

xiyuezh July 12, 2021 01:25PM

Re: Add Time Slicing data to Nifti file

xiyuezh July 07, 2021 04:02PM

Re: Add Time Slicing data to Nifti file

Peter Molfese July 07, 2021 05:32PM

Re: Add Time Slicing data to Nifti file

xiyuezh July 08, 2021 11:53AM

Re: Add Time Slicing data to Nifti file

Peter Molfese July 08, 2021 01:12PM

Re: Add Time Slicing data to Nifti file

xiyuezh July 08, 2021 05:40PM

Re: Add Time Slicing data to Nifti file

rick reynolds July 13, 2021 04:13PM

Re: Add Time Slicing data to Nifti file

xiyuezh July 13, 2021 05:57PM

Re: Add Time Slicing data to Nifti file

Peter Molfese July 13, 2021 06:13PM

Re: Add Time Slicing data to Nifti file

xiyuezh July 13, 2021 06:59PM

Re: Add Time Slicing data to Nifti file

rick reynolds July 13, 2021 09:22PM

Re: Add Time Slicing data to Nifti file

xiyuezh July 15, 2021 10:55AM



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