AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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kaczmarj
July 10, 2021 02:09PM
Hi Bennet,

The AFNI Docker image is based on neurodebian 18.04 (which is based on ubuntu 18.04). R is installed using `apt-get install r-base`, and that installs 3.4.4 as you see. On the Ubuntu 18.04 website for r-base, you can see that 3.4.4 is the R version that is installed on ubuntu 18.04.

The easiest way to install a different R version would be to use a different base image. Specifically, you can use a more recent neurodebian version, like nd21.04. That will install R version 4.0.4, as you can see here. This will require rebuilding the AFNI docker image.

Best,
Jakub
[kaczmarj.github.io]
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Subject Author Posted

R version in Docker image

justbennet July 08, 2021 01:42PM

Re: R version in Docker image

kaczmarj July 10, 2021 02:09PM

Re: R version in Docker image

justbennet July 11, 2021 07:33AM

Re: R version in Docker image

ptaylor July 12, 2021 08:47AM