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Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Doughboys
December 16, 2021 07:09PM
Hello Gang,
I was running a 3dLME command: 
3dLME -prefix 3dLME_glt.nii.gz -jobs 20 -mask template2_mask2mm.nii.gz -model "Sexe*age" -qVars "age" -ranEff "~1+age" -num_glt 4 -gltLabel 1 "05MF" -gltCode 1 "Sexe : 0.5*M +0.5*F age :" -gltLabel 2 "1MF" -gltCode 2 "Sexe : 1*M -1*F age :" -gltLabel 3 "1MF" -gltCode 3 "Sexe : 1*M age :" -gltLabel 4 "1F" -gltCode 4 "Sexe : 1*F age :" -dataTable @disign_matrix.txt -resid resid.nii.gz
that was working perfectly fine on a variety of NODDI images,
however for one of them I have got: 

** Error: 
   At least one of the input files has different dimensions!
Run "3dinfo -header_line -prefix -same_grid -n4 *.HEAD" in the directory where
the files are stored, and pinpoint out which file(s) is the trouble maker.
Replace *.HEAD with *.nii or something similar for other file formats.

I ran "3dinfo -header_line -prefix -same_grid -n4 *.HEAD" and I have got: 
Ntimes	Dval	Nv	Nvi	Nijk	Di_Dj_Dk
 Oliver2019_02_02dir_D99.nii.gz	1	64	64	48	3
 Oliver2019_06_01dir_D99.nii.gz	1	64	64	48	3
 Oliver2019_09_15dir_D99.nii.gz	1	64	64	48	3
 Oliver2019_12_08dir_D99.nii.gz	1	64	64	48	3
 Oliver2020_03_14dir_D99.nii.gz	1	64	64	48	3
 Oliver2020_06_10dir_D99.nii.gz	1	64	64	48	3
 Oliver2020_09_18dir_D99.nii.gz	1	64	64	48	3
 Oliver2020_12_18dir_D99.nii.gz	1	64	64	48	3

for all my images.
I am not sure what is not working.
Thank you very much for your help
Clem
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Subject Author Posted

3dLME At least one of the input files has different dimensions!

Doughboys December 16, 2021 07:09PM

Re: 3dLME At least one of the input files has different dimensions!

gang December 17, 2021 09:08AM

Re: 3dLME At least one of the input files has different dimensions!

Doughboys December 17, 2021 05:20PM

Re: 3dLME At least one of the input files has different dimensions!

gang December 20, 2021 08:52AM