AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
April 07, 2022 12:19PM
Thank you, Gang.

Here is the script I tried:
3dMVM -prefix SentenceWordVol -jobs 4 \
-bsVars 'group' \
-wsVars 'condition*noisy' \
-num_glt 9 \
-gltLabel 1 A_btngrp -gltCode 1 'group : 1*sentence -1*word condition : 1*A' \
-gltLabel 2 AV_btngrp -gltCode 2 'group : 1*sentence -1*word condition : 1*AV' \
-gltLabel 3 V_btngrp -gltCode 3 'group : 1*sentence -1*word condition : 1*V' \
-gltLabel 4 An_btngrp -gltCode 4 'group : 1*sentence -1*word condition : 1*A noisy : 1*yes' \
-gltLabel 5 Ac_btngrp -gltCode 5 'group : 1*sentence -1*word condition : 1*A noisy : 1*no' \
-gltLabel 6 AnV_btngrp -gltCode 6 'group : 1*sentence -1*word condition : 1*AV noisy : 1*yes' \
-gltLabel 7 AcV_btngrp -gltCode 7 'group : 1*sentence -1*word condition : 1*AV noisy : 1*no' \
-gltLabel 8 A_AV_by_group -gltCode 8 'group : 1*sentence -1*word condition : 1*A -1*AV' \
-gltLabel 9 diff_of_diff -gltCode 9 'group : 1*sentence -1*word condition : 1*A -1*AV noisy : 1*yes -1*no' \
-dataTable @table.txt

Here is the error I got in the terminal:
Error in seq.default(wd + ii, len, wd) : wrong sign in 'by' argument
Calls: process.MVM.opts -> data.frame -> cbind -> seq -> seq.default
Execution halted

Did I not set my contrasts correct?

thank you so much for helping!


Yue
Subject Author Posted

2-group comparison using AFNI

yue1988 April 04, 2022 04:28PM

Re: 2-group comparison using AFNI

gang April 05, 2022 10:31PM

Re: 2-group comparison using AFNI

yue1988 April 07, 2022 12:19PM

Re: 2-group comparison using AFNI

gang April 07, 2022 11:12PM

Re: 2-group comparison using AFNI

yue1988 April 08, 2022 12:12PM

Re: 2-group comparison using AFNI

gang April 09, 2022 12:05PM

Re: 2-group comparison using AFNI

yue1988 April 11, 2022 08:57AM

Re: 2-group comparison using AFNI

gang April 11, 2022 02:40PM

Re: 2-group comparison using AFNI

yue1988 April 11, 2022 08:08PM