History of AFNI updates  

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April 29, 2022 05:25PM
Hi, Philipp-

Well, I guess I asked for it... Silly me.

In the transformation_steps.jpg image you sent, is Panel A-left really a subject native space thing? It looks like a template.

Just to check about deobliquing, can you generate the following images:
@djunct_overlap_check \
    -ulay orig_T1_UNI-DEN.nii.gz  \
    -olay MNI152_T1_1mm.nii.gz   \
    -prefix olap_t1_mni
and
@djunct_overlap_check \
    -ulay target_native mtc.nii.gz  \
    -olay orig_T1_UNI-DEN.nii.gz  \
    -prefix olap_epi_t1

Each will likely make 2 images (one ignoring obliquity values, and one applying them), and it would be good to see both---because of a quirk of the MB underlying software, this might require 2 replies (because I think the most images that can be uploaded per post is 2).

Let's start there...

--pt
Subject Author Posted

Nonlinear registration for hires slab Attachments

philippn April 29, 2022 11:45AM

Re: Nonlinear registration for hires slab

ptaylor April 29, 2022 05:25PM

Re: Nonlinear registration for hires slab Attachments

philippn April 29, 2022 05:51PM



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