AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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rick reynolds
May 09, 2022 02:47PM
Thanks for the details, Philpp.

Indeed, there seem to be 16 runs of data in that directory (note the 'run' column), and Dimon is set up to process just one run at a time.

You can partition the runs using @move.to.series.dirs (to copy the files, move them, or with the first example, just test to see what it would do): 
@move.to.series.dirs -test *.IMA
@move.to.series.dirs -action copy *.IMA
@move.to.series.dirs -action move *.IMA

Note that dcm2niix_afni can deal with multiple runs at once, as an alternative.

- rick
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Subject Author Posted

Dimon – "Error: missing slice(s) in first volume!"

Philipp May 06, 2022 04:26AM

Re: Dimon – "Error: missing slice(s) in first volume!"

rick reynolds May 09, 2022 01:57PM

Re: Dimon – "Error: missing slice(s) in first volume!"

rick reynolds May 09, 2022 02:47PM

Re: Dimon – "Error: missing slice(s) in first volume!"

Philipp May 11, 2022 02:11AM