AFNI Message Board

History of AFNI updates  

|
May 17, 2022 08:38PM
Hi Rick,

I wonder if another error message immediately following the afni_python_wrapper.py command is relevant to this stream:
afni_python_wrapper.py -eval data_file_to_json()
gen_ss_review_scripts.py -exit0 -init_uvars_json out.ap_uvars.json -write_uvars_json out.ss_review_uvars.json
** guess tcat: failed to determine subject ID from pb00 files
** failed to guess subject ID
** failed to init basics...

Input to the gen_ss_review_scripts.py, out.ap_uvas.json, has the following contents:
 out_limit      : 0.15
  copy_anat      : sub-0128_ses-01_space-MNI152NLin2009cAsym_desc-preproc_T1w+tlrc.HEAD
  mask_dset      : full_mask.sub0128.CSPLIN+tlrc.HEAD
  ss_review_dset : out.ss_review.sub0128.CSPLIN.txt

The output out.ss_review_uvars.json is not created due to the error.
The pb00 files in the same folder are:
pb00.sub0128.CSPLIN.r01.tcat+tlrc.BRIK	pb00.sub0128.CSPLIN.r02.tcat+tlrc.BRIK
pb00.sub0128.CSPLIN.r01.tcat+tlrc.HEAD	pb00.sub0128.CSPLIN.r02.tcat+tlrc.HEAD

Erik
Subject Author Posted

afni_python_wrapper.py error

audachang May 10, 2022 01:24AM

Re: afni_python_wrapper.py error

rick reynolds May 10, 2022 09:11AM

Re: afni_python_wrapper.py error

audachang May 12, 2022 09:56PM

Re: afni_python_wrapper.py error

rick reynolds May 13, 2022 09:20AM

Re: afni_python_wrapper.py error

audachang May 17, 2022 08:38PM

Re: afni_python_wrapper.py error

rick reynolds May 18, 2022 04:08PM

Re: afni_python_wrapper.py error

audachang May 18, 2022 07:07PM

Re: afni_python_wrapper.py error

rick reynolds May 20, 2022 01:44PM



Sorry, only registered users may post in this forum.

Click here to login