History of AFNI updates  

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May 30, 2022 09:14AM
Hello AFNI gurus,

I apologize in advance for my tech knowledge deficiencies...I am trying to update our installation of AFNI on our compute resource (linux) for multiple users. I successfully updated AFNI for myself, however, when I try to do so for multiple users it seems to actually lead to making it so I can't call afni as a single user anymore either. This is what it know gives me when I try afni -ver

tue50988@cla19097:~$ afni -ver
-bash: /usr/local/abin/afni: cannot execute binary file: Exec format error


I tried updating using some code found online in searching for how-to's. I have copied the code and output below. THANK YOU!

tue50988@cla19097:~$ tcsh @update.afni.binaries -package macos_10.12_local -do_extras
-- running @update.afni.binaries version 3.20, May 3, 2022
-- have AFNI binaries under /usr/local/abin
-- install dir: using existing /usr/local/abin
-- any downloads will be from [afni.nimh.nih.gov] via wget

-- attempting to install package macos_10.12_local under
install dir: /usr/local/abin...
-- have install dir
++ working in new temp dir, .tmp.install
++ getting install prog: wget bin/misc/@update.afni.binaries ...
wget [afni.nimh.nih.gov]
--2022-05-30 09:10:48-- [afni.nimh.nih.gov]
Resolving afni.nimh.nih.gov (afni.nimh.nih.gov)... 156.40.187.114, 2607:f220:419:4103::114
Connecting to afni.nimh.nih.gov (afni.nimh.nih.gov)|156.40.187.114|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 49912 (49K) [text/plain]
Saving to: ‘@update.afni.binaries’

@update.afni.binaries 100%[=====================================================================>] 48.74K --.-KB/s in 0.02s

2022-05-30 09:10:48 (2.49 MB/s) - ‘@update.afni.binaries’ saved [49912/49912]

-- fixing lost permissions on @update.afni.binaries
-- @update.afni.binaries is current, continuing with this version...
++ downloading test file: wget macos_10.12_local/afni ...
--2022-05-30 09:10:48-- [afni.nimh.nih.gov]
Resolving afni.nimh.nih.gov (afni.nimh.nih.gov)... 156.40.187.114, 2607:f220:419:4103::114
Connecting to afni.nimh.nih.gov (afni.nimh.nih.gov)|156.40.187.114|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 12275956 (12M)
Saving to: ‘afni’

afni 100%[=====================================================================>] 11.71M 77.1MB/s in 0.2s

2022-05-30 09:10:48 (77.1 MB/s) - ‘afni’ saved [12275956/12275956]

++ no update needed
tue50988@cla19097:~$ cp $HOME/abin/AFNI.afnirc $HOME/.afnirc
cp: cannot stat '/home/local/TU/tue50988/abin/AFNI.afnirc': No such file or directory
tue50988@cla19097:~$ suma -update_env
-bash: /usr/local/abin/suma: cannot execute binary file: Exec format error
Subject Author Posted

AFNI Install for Multiple users

MeganQ May 30, 2022 09:14AM

Re: AFNI Install for Multiple users

rick reynolds May 30, 2022 10:05AM

Re: AFNI Install for Multiple users

MeganQ May 30, 2022 10:12AM

Re: AFNI Install for Multiple users

rick reynolds May 30, 2022 08:36PM

Re: AFNI Install for Multiple users

MeganQ May 31, 2022 08:22AM



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