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June 15, 2022 03:48PM
Hi Matt-

The script did work OK for me, that is odd...

This line:
dset_mask = `ls ${dset_t1:gas/.nii/_mask.nii/)`
is just taking the string stored in ${dset_t1}, and replacing ".nii" from it with "_mask.nii", and then searching for that new file name. You can just replace it with the actual dset name, I was aiming to generalize it, but certainly that could be hardwired to that actual file name in that subdir.

--pt
Subject Author Posted

Using MNI152NLin2009cAsym template in FATCAT?

Matthew Hoptman June 15, 2022 01:08PM

Re: Using MNI152NLin2009cAsym template in FATCAT?

ptaylor June 15, 2022 02:38PM

Re: Using MNI152NLin2009cAsym template in FATCAT?

Matthew Hoptman June 15, 2022 02:51PM

Re: Using MNI152NLin2009cAsym template in FATCAT?

ptaylor June 15, 2022 03:44PM

Re: Using MNI152NLin2009cAsym template in FATCAT?

Matthew Hoptman June 15, 2022 03:27PM

Re: Using MNI152NLin2009cAsym template in FATCAT?

ptaylor June 15, 2022 03:45PM

Re: Using MNI152NLin2009cAsym template in FATCAT?

Matthew Hoptman June 15, 2022 03:27PM

Re: Using MNI152NLin2009cAsym template in FATCAT?

ptaylor June 15, 2022 03:48PM

Re: Using MNI152NLin2009cAsym template in FATCAT?

Matthew Hoptman June 15, 2022 04:30PM



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