AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 06, 2022 05:19PM
Hi-

The "extra" dimension there is because there is the following label:
"0" "Unknown"
So, it is not a problem. There are 4 header lines in the NIML-format output, so if you run:
3dinfo -labeltable MNI_Glasser_HCP_v1.0.nii.gz | wc -l
to count the number of lines output to the terminal, you get: 365. There are 3 "header" lines at the top, which you can see with:
3dinfo -labeltable MNI_Glasser_HCP_v1.0.nii.gz | head
... and one at the bottom of the output. Then there are 360 non-zero ROI lines, and one zero-ROI one.

I don't actually see a labeltable in the MNI_caez_ml_18+tlrc file... It has atlaspoints, though? Running
3dinfo -atlas_points MNI_caez_mpm_18+tlrc | grep ATLAS_POINT | wc -l
... produced 75.

-pt
Subject Author Posted

Mismatch Number of ROI's in CAEZ_ml_18 Atlas

Muhammad Shahzaib August 30, 2022 08:19AM

Re: Mismatch Number of ROI's in CAEZ_ml_18 Atlas

ptaylor August 30, 2022 09:38AM

Re: Mismatch Number of ROI's in CAEZ_ml_18 Atlas

Muhammad Shahzaib September 06, 2022 04:54PM

Re: Mismatch Number of ROI's in CAEZ_ml_18 Atlas

ptaylor September 06, 2022 05:19PM

Re: Mismatch Number of ROI's in CAEZ_ml_18 Atlas

Muhammad Shahzaib September 07, 2022 08:52AM

Re: Mismatch Number of ROI's in CAEZ_ml_18 Atlas

ptaylor September 07, 2022 09:32AM

Re: Mismatch Number of ROI's in CAEZ_ml_18 Atlas

Daniel Glen September 07, 2022 05:27PM

Re: Mismatch Number of ROI's in CAEZ_ml_18 Atlas

Muhammad Shahzaib September 08, 2022 04:24AM