AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 28, 2022 01:02PM
Thanks for sending the files. Indeed, they have non-printable characters in them, meaning they are not in pure ASCII text format.

You can use file_tool to fix them, for example. But it would be good to figure out editing methods that will not lead to this. It can cause trouble in scripts, too.

For now, you can test a file using something like:

file_tool -test -infile TIMING_FILE


Add something like -prefix to fix it. For example, using tcsh, not bash:

mkdir fixed.files
foreach file ( sub*.txt )
   file_tool -infile $file -test -prefix fixed.files/$file
end

Does that seem reasonable?

- rick
Subject Author Posted

first run missing from design matrix after 3ddeconvolve Attachments

bfuchs September 27, 2022 01:35PM

Re: first run missing from design matrix after 3ddeconvolve

rick reynolds September 27, 2022 06:30PM

Re: first run missing from design matrix after 3ddeconvolve

rick reynolds September 28, 2022 01:02PM

Re: first run missing from design matrix after 3ddeconvolve

bfuchs September 28, 2022 03:35PM

Re: first run missing from design matrix after 3ddeconvolve

rick reynolds September 28, 2022 06:58PM