AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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rick reynolds
November 11, 2022 04:09PM
That is right. To a fair degree, afni_proc.py does not know (or attempt to figure out) the number of time points that have any stim at all in them (which themselves would overlap, since many studies have multiple stimulations within a single TR (cue, button press, etc).

In any case, the number of TRs per stim (class) refers to the number of non-zero time points in the regressor.
For descriptions, see: 

gen_ss_review_scripts.py -help_fields

- rick
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Number of censored TRs Attachments

giono November 11, 2022 11:48AM

Re: Number of censored TRs

ptaylor November 11, 2022 03:01PM

Re: Number of censored TRs

rick reynolds November 11, 2022 04:09PM