Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

-blur_size   SOMETHING
-anat_has_skull  YES_OR_NO

-regress_apply_mot_types demean deriv \

# Once the TR is registered
cd $afni_dir/all_TRs
name=TR$last_brik
mkdir $name
cd $name
#changing this
cp $nii_dir/${last_brik}.nii.gz .
#to
3dcopy $nii_dir/${last_brik}.nii.gz ${last_brik}
#and changing this
3drefit -oblique_recenter ${last_brik}.nii.gz
3drefit -deoblique ${last_brik}.nii.gz
#to this
3drefit -oblique_recenter ${last_brik}+orig.
3drefit -deoblique ${last_brik}+orig.