hello
I am new to afni and after running my first level models I am seeing the x axis is reversed (which is not that unusual) however I am also seeing the y axis is reversed. for example I am showing the left caudate at -16 -14 12 instead of 16 14 12 (it is the y axis reversed that has me most concerned)
is there a way I can correct for these reversals or at least correct for the y axis? I would prefer my data to be in neurological format. The data comes from the scanner is radiological format.
thank you for your help
jef