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AFNI Message Board
Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely, AFNI HQ
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely, AFNI HQ
| May 17, 2023 07:18PM | |
Good Afternoon,
We had recently updated our AFNI binaries a little bit ago:
afni -ver
Precompiled binary linux_openmp_64: May 8 2023 (Version AFNI_23.1.05 'Publius Helvius Pertinax')
When I run @sswarper using this command:
@SSwarper -input sub1065_anatPU2.nii.gz -base MNI152_2009_template_SSW.nii.gz -subid sub1065 -SSopt '-blur_fwhm 2' -odir anatwarp2/
I get the following error:
++ 3dNwarpApply: AFNI version=AFNI_23.1.05 (May 8 2023) [64-bit]
++ Authored by: Zhark the Warped
** FATAL ERROR: can't open -master dataset 'anatwarp2//anatS.sub1065.nii'
** Program compile date = May 8 2023
** ERROR: program failed in Step 5a
Looking at the files it created in the 'anatwarp2' directory, I confirmed that the file it says it can't open is not present in the directory. I do not know what the Step 5a is referring to here either, so I don't know how to fix the problem.
Any advice or pointers to find the issue?
Thanks,
Danny
We had recently updated our AFNI binaries a little bit ago:
afni -ver
Precompiled binary linux_openmp_64: May 8 2023 (Version AFNI_23.1.05 'Publius Helvius Pertinax')
When I run @sswarper using this command:
@SSwarper -input sub1065_anatPU2.nii.gz -base MNI152_2009_template_SSW.nii.gz -subid sub1065 -SSopt '-blur_fwhm 2' -odir anatwarp2/
I get the following error:
++ 3dNwarpApply: AFNI version=AFNI_23.1.05 (May 8 2023) [64-bit]
++ Authored by: Zhark the Warped
** FATAL ERROR: can't open -master dataset 'anatwarp2//anatS.sub1065.nii'
** Program compile date = May 8 2023
** ERROR: program failed in Step 5a
Looking at the files it created in the 'anatwarp2' directory, I confirmed that the file it says it can't open is not present in the directory. I do not know what the Step 5a is referring to here either, so I don't know how to fix the problem.
Any advice or pointers to find the issue?
Thanks,
Danny
| Subject | Author | Posted |
|---|---|---|
|
DannyS | May 17, 2023 07:18PM |
|
ptaylor | May 18, 2023 09:37AM |
|
DannyS | May 18, 2023 11:49AM |
|
ptaylor | May 18, 2023 11:57AM |
|
DannyS | May 18, 2023 12:31PM |
|
ptaylor | May 18, 2023 01:30PM |
|
DannyS | May 18, 2023 05:52PM |
|
ptaylor | May 18, 2023 10:45PM |
|
ptaylor | May 18, 2023 12:09PM |
