AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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Ziad
March 26, 2003 11:04AM
Hello Carl,

The only time I have seen F stat signed is for display purposes, it is of course meaningless as a statistic. Some people, who shall remain nameless, multiply the sign of a regressor's coefficient by its F value as a simple way to utilize the entire range of a two tone colormap.

That is done by using the following equation assuming C is the sub-brick with the coefficient and F is the sub-brick with the statistic.

-expr ' F * (step(C) - step(-C)) '

step(C) = 1 when C > 0
= 0 when C < 0
step(-C) = 0 when C > 0
= 1 when C < 0

so
( step(C) - step(-C) ) = 1 when C > 0
= -1 when C < 0

I do not understand why you are trying to sign the Full F stat. Unlike the partial F, this one has no coefficient that goes with it because it is testing whether any of the coefficients was significantly > 0. What are you defining as negative activation ? What if one stimulus caused a negative response while another cause a positive one ? If you insist on signing the F stat, perhaps you should only sign the partial F stats.

cheers.
-z
Subject Author Posted

how do i get a signed f stat ?

carl March 25, 2003 06:11PM

Re: how do i get a signed f stat ?

Craig Stark March 26, 2003 09:19AM

Re: how do i get a signed f stat ?

Ziad March 26, 2003 11:04AM