:orphan:

.. _ahelp_adjunct_apqc_tsnr_with_mask:

***************************
adjunct_apqc_tsnr_with_mask
***************************

.. contents:: :local:


| 

    

OVERVIEW
========

.. code-block:: none

    
    Just an adjunct program for making TSNR plots for APQC.
    
    Ceci n'est pas un fichier d'aide utile!
    
    written by PA Taylor.
    

EXTRA OPTS
==========

.. code-block:: none

    
    -montgap        A
    -montcolor      A 
    -montx          A
    -monty          A
    -opacity        A
    -set_dicom_xyz  A B C
    -set_ijk        A B C
    -ulay_range_nz  A B 
    -ulay_range     A B
    -delta_slices   A B C
    

EXAMPLE
=======

.. code-block:: none

    
    adjunct_apqc_tsnr_with_mask                       \
        -ulay         MNI152_2009_template_SSW.nii.gz \
        -focus        MNI152_2009_template_SSW.nii.gz \
        -olay         TSNR*HEAD                       \
        -mask         mask_epi_anat.*HEAD             \
        -prefix       img                             \
        -prefix_cbar  img.cbar